Python Module Index

m


	m
	`morphoclass`
	`morphoclass.cleanlab`
	`morphoclass.console`
	`morphoclass.console.cmd_evaluate`
	`morphoclass.console.cmd_extract_features`
	`morphoclass.console.cmd_morphometrics`
	`morphoclass.console.cmd_organise_dataset`
	`morphoclass.console.cmd_performance_table`
	`morphoclass.console.cmd_plot_dataset_stats`
	`morphoclass.console.cmd_preprocess_dataset`
	`morphoclass.console.cmd_train`
	`morphoclass.console.cmd_xai`
	`morphoclass.console.dataset_preprocessor`
	`morphoclass.console.evaluate`
	`morphoclass.console.helpers`
	`morphoclass.console.main`
	`morphoclass.console.outlier_detection`
	`morphoclass.console.performance_table`
	`morphoclass.console.stats_plotter`
	`morphoclass.console.transfer_learning`
	`morphoclass.constants`
	`morphoclass.data`
	`morphoclass.data.filters`
	`morphoclass.data.morphology_data`
	`morphoclass.data.morphology_data_loader`
	`morphoclass.data.morphology_dataset`
	`morphoclass.data.tns_dataset`
	`morphoclass.deepwalk`
	`morphoclass.features`
	`morphoclass.features.non_graph`
	`morphoclass.layers`
	`morphoclass.layers.attention_global_pool`
	`morphoclass.layers.bidirectional_block`
	`morphoclass.layers.bidirectional_res_block`
	`morphoclass.layers.cat`
	`morphoclass.layers.cheb_conv`
	`morphoclass.layers.cheb_conv_separable`
	`morphoclass.layers.perslay`
	`morphoclass.layers.running_std`
	`morphoclass.layers.tree_lstm_pool`
	`morphoclass.metrics`
	`morphoclass.model_utils`
	`morphoclass.models`
	`morphoclass.models.bidirectional_net`
	`morphoclass.models.cnnet`
	`morphoclass.models.concatecnnet`
	`morphoclass.models.concatenet`
	`morphoclass.models.coriander_net`
	`morphoclass.models.hbnet`
	`morphoclass.models.man_net`
	`morphoclass.models.man_res_nets`
	`morphoclass.models.multi_adj_net`
	`morphoclass.morphometrics`
	`morphoclass.morphometrics.cli`
	`morphoclass.orientation`
	`morphoclass.report`
	`morphoclass.report.plumbing`
	`morphoclass.report.xai`
	`morphoclass.training`
	`morphoclass.training.cli`
	`morphoclass.training.rd_dataset_prep`
	`morphoclass.training.reports`
	`morphoclass.training.reports.transfer_learning_report`
	`morphoclass.training.tns_utils`
	`morphoclass.training.trainers`
	`morphoclass.training.training_config`
	`morphoclass.training.training_log`
	`morphoclass.training.training_loop_cv`
	`morphoclass.training.training_loop_loo`
	`morphoclass.training.training_loop_regression`
	`morphoclass.training.training_loop_simple`
	`morphoclass.training.transfer_learning`
	`morphoclass.transforms`
	`morphoclass.transforms.add_one_hot_labels`
	`morphoclass.transforms.augmentors`
	`morphoclass.transforms.augmentors.add_nodes_at_intervals`
	`morphoclass.transforms.augmentors.add_random_points_to_reduction_mask`
	`morphoclass.transforms.augmentors.add_section_middle_points`
	`morphoclass.transforms.augmentors.apply_node_reduction_masks`
	`morphoclass.transforms.augmentors.branching_only_neurites`
	`morphoclass.transforms.augmentors.branching_only_neuron`
	`morphoclass.transforms.augmentors.equalize_node_counts`
	`morphoclass.transforms.augmentors.extract_branching_node_reduction_masks`
	`morphoclass.transforms.augmentors.orient_apicals`
	`morphoclass.transforms.augmentors.orient_neuron`
	`morphoclass.transforms.augmentors.random_jitter`
	`morphoclass.transforms.augmentors.random_rotation`
	`morphoclass.transforms.augmentors.random_stretching`
	`morphoclass.transforms.compose`
	`morphoclass.transforms.edge_features`
	`morphoclass.transforms.edge_features.extract_distance_weights`
	`morphoclass.transforms.edge_features.extract_edge_features`
	`morphoclass.transforms.edge_features.extract_edge_index`
	`morphoclass.transforms.extract_tmd_neurites`
	`morphoclass.transforms.extract_tmd_neuron`
	`morphoclass.transforms.global_feature_to_label`
	`morphoclass.transforms.global_features`
	`morphoclass.transforms.global_features.abstract_global_feature_extractor`
	`morphoclass.transforms.global_features.average_branch_order`
	`morphoclass.transforms.global_features.average_radius`
	`morphoclass.transforms.global_features.extract_maximal_apical_path_length`
	`morphoclass.transforms.global_features.extract_number_branch_points`
	`morphoclass.transforms.global_features.extract_number_leaves`
	`morphoclass.transforms.global_features.total_path_length`
	`morphoclass.transforms.helper`
	`morphoclass.transforms.make_copy`
	`morphoclass.transforms.node_features`
	`morphoclass.transforms.node_features.extract_branching_angles`
	`morphoclass.transforms.node_features.extract_const_feature`
	`morphoclass.transforms.node_features.extract_coordinates`
	`morphoclass.transforms.node_features.extract_diameters`
	`morphoclass.transforms.node_features.extract_distances`
	`morphoclass.transforms.node_features.extract_node_features`
	`morphoclass.transforms.node_features.extract_node_onehot_properties`
	`morphoclass.transforms.node_features.extract_path_distances`
	`morphoclass.transforms.node_features.extract_radial_distances`
	`morphoclass.transforms.node_features.extract_vertical_distances`
	`morphoclass.transforms.scalers`
	`morphoclass.transforms.scalers.abstract_scaler`
	`morphoclass.transforms.scalers.manual_scaler`
	`morphoclass.transforms.scalers.min_max_scaler`
	`morphoclass.transforms.scalers.robust_scaler`
	`morphoclass.transforms.scalers.standard_scaler`
	`morphoclass.transforms.zero_out_features`
	`morphoclass.types`
	`morphoclass.unsupervised`
	`morphoclass.unsupervised.plotting`
	`morphoclass.utils`
	`morphoclass.vis`
	`morphoclass.xai`
	`morphoclass.xai.embedding_extractor`
	`morphoclass.xai.embedding_visualization`
	`morphoclass.xai.grad_cam_explainer`
	`morphoclass.xai.grad_cam_on_models`
	`morphoclass.xai.model_attributions`
	`morphoclass.xai.node_saliency`